Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCCAGGAACTCCATCTTGGTCTGTGCTGAGGAGCAAGG
..((.(((((((((((((((((&))))))))))).....................)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129908
GeneSymbolGASK1A
Binding site577,619
Score0.846
Seed0
Au0.426
Energy-23.5
Binding len42
Me-9.076
Phylopstem0.31919583947368413
Phylopflank0.352095285
Longest consecutive pairings11
Position of longest consecutive pairings31
Pairings in 3prime end8
PositionCDS
2D Structure