Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCTGGAGAGAAGCAAGGAGCAGCTGCTCTCGGAGAGGAGGCTGGTGC
(((((((((((((((((((((.&.)))).).)))))))))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001129979
GeneSymbolSYCE1L
Binding site499,549
Score0.923
Seed1
Au0.294
Energy-27.7
Binding len26
Me-3.938
Phylopstem0.5944469
Phylopflank0.72819334
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure