Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTTTTGAGCGCATGCTTTGGCGGGTATGCCGGGG
.((((((((((..(((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130021
GeneSymbolATP6V0A1
Binding site674,711
Score0.846
Seed1
Au0.441
Energy-20.3
Binding len16
Me-8.429
Phylopstem0.2827874
Phylopflank-0.03050125287499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure