Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((.((&)))))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130031
GeneSymbolZNF562
Binding site11111,11134
Score0.923
Seed1
Au0.426
Energy-26.9
Binding len23
Me-10.109
Phylopstem-0.005692272727272695
Phylopflank-0.037946060000000004
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end7
Position3UTR
2D Structure