Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTTTGATGTCAGT
..(((((((.(((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130046
GeneSymbolCCL20
Binding site98,114
Score0.846
Seed1
Au0.456
Energy-15.8
Binding len16
Me-7.056
Phylopstem-0.0931553428571429
Phylopflank0.99398673125
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure