Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCACACTTGTGTGGTAGGA
.((((.((((((((((.(((..&)))))).))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130049
GeneSymbolDOCK9
Binding site4119,4139
Score0.846
Seed0
Au0.544
Energy-17.8
Binding len20
Me-5.694
Phylopstem-0.30094791818181815
Phylopflank-0.22043103375000003
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure