Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCACACTTGTGTGGTAGGA
.((((.((((((((((.(((..&)))))).))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130050
GeneSymbolDOCK9
Binding site3928,3948
Score0.923
Seed0
Au0.544
Energy-17.8
Binding len20
Me-5.694
Phylopstem0.6437482363636363
Phylopflank1.4380309700000002
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end5
Position3UTR
2D Structure