Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGTGTATACTCAGGA
.(((((.(((((.((((((...&)))))).))))).).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130050
GeneSymbolDOCK9
Binding site2606,2626
Score0.846
Seed0
Au0.662
Energy-17.8
Binding len20
Me-6.626
Phylopstem3.057495133333333
Phylopflank2.007482354999999
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure