Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTGCATGCGATGGAAGGC
.(((..(((...((((((((((&))))))))))...)))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130050
GeneSymbolDOCK9
Binding site2713,2735
Score0.846
Seed0
Au0.515
Energy-17.3
Binding len22
Me-17.227
Phylopstem4.7654518999999995
Phylopflank5.314651387500003
Longest consecutive pairings10
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure