Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGAGCCTGGACCAGTGC
((((((.(((.(((((((....&)))))))...))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130081
GeneSymbolPLD1
Binding site5383,5403
Score0.923
Seed0
Au0.544
Energy-23.6
Binding len20
Me-8.306
Phylopstem5.112724285714285
Phylopflank4.135163931125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure