Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGAGGCAGCAGCTGCATCCTCAGAGAGGAAGCCAGG
..((((((((((((((((....&.))))))))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130101
GeneSymbolNR1H3
Binding site264,306
Score0.923
Seed1
Au0.353
Energy-27.6
Binding len19
Me-4.957
Phylopstem0.08741963647058826
Phylopflank0.514295618375
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure