Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCAGCAACACGCCAGGA
.((((((......(((((((..&))))))).......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130144
GeneSymbolLTBP3
Binding site2794,2815
Score0.846
Seed1
Au0.456
Energy-18.9
Binding len21
Me-15.867
Phylopstem2.896005285714286
Phylopflank1.1981823025000002
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure