Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCAGGCTGGAGTGCAGTGC
((((((((((..((((((....&))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130182
GeneSymbolDNAJA4
Binding site1364,1384
Score0.846
Seed1
Au0.294
Energy-24.2
Binding len20
Me-10.109
Phylopstem2.5003303636363636
Phylopflank1.02101678375
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure