Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCGGATGAGGGCGAGA
..((.((.(((((((((((...&))))))).)))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130182
GeneSymbolDNAJA4
Binding site314,332
Score0.846
Seed0
Au0.515
Energy-21.8
Binding len18
Me-11.39
Phylopstem5.95979075
Phylopflank4.8396254249999995
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure