Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACGAGGAGGACGAAGACGGGCCCCAGGCTGGAGTGCAGTGC
((((((((((..((((((....&.))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130183
GeneSymbolDNAJA4
Binding site1083,1126
Score0.923
Seed1
Au0.294
Energy-24.6
Binding len21
Me-10.109
Phylopstem4.444922727272727
Phylopflank2.6197043724999993
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end4
PositionCDS
2D Structure