Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCACTCTGTAACCCAGGCTGGAGTGCAGTGG
((((((((((..(((((((...&.)))))))..))))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130475
GeneSymbolTHAP5
Binding site1987,2020
Score0.846
Seed1
Au0.412
Energy-27.2
Binding len22
Me-10.109
Phylopstem0.3382426
Phylopflank0.40232086075
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure