Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTTAGATCACTGCAGCTTCTAGGACCCGGTT
.(((((.((((.(((((((((.&)))))))))..............)))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130523
GeneSymbolCSDE1
Binding site3687,3721
Score0.923
Seed0
Au0.618
Energy-19.1
Binding len34
Me-8.684
Phylopstem4.692837444444445
Phylopflank3.988391213750001
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure