Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAAAAATTAGCCAGGC
.((((((......((((((...&)))))).......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130524
GeneSymbolAP1M1
Binding site9139,9159
Score0.846
Seed1
Au0.544
Energy-17.3
Binding len20
Me-15.867
Phylopstem0.12488999999999999
Phylopflank0.024344899999999985
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
Position3UTR
2D Structure