Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTTCACTGTTTGCAACTCTCATGTTCTGTGCATTGCAAGTGTGCCAGGTG
(((((((((((((((((.(...&.).))))))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001130528
GeneSymbolSPAG9
Binding site2561,2613
Score0.923
Seed1
Au0.485
Energy-23.7
Binding len25
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure