Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCTCTGGGTTCCCCATTTTTACTATTAAGAAGACCAGTGA
(((((((((((....((((((.&))))))...)))......................)).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001130674
GeneSymbolCALU
Binding site2912,2956
Score0.923
Seed1
Au0.618
Energy-20.7
Binding len44
Me-10.166
Phylopstem0.3247059070588236
Phylopflank0.31527045975
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end6
Position3UTR
2D Structure