Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTTCTTCAGTGGCAAGCTTTA&GAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGCA
.(((((((((((((.(((((..&)))))))))))).................)))))).
Details
MiRNAhsa-miR-22-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site78,114
Score0.846
Seed1
Au0.471
Energy-19.6
Binding len36
Me-4.529
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings24
Pairings in 3prime end5
Position5UTR
2D Structure