Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGCAAGATGCTGGCATAGCT&TGCCGAAAACAGGCCGCAAGAGAGCATCTGCCC
.(((.((((((((((......&.))).......)))))))))).
Details
MiRNAhsa-miR-31-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site88,121
Score0.846
Seed0
Au0.456
Energy-18.1
Binding len22
Me-8.145
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure