Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGCAATGTAAGCACTTCTTAC&GTAAATTTTCAAGATGGTATTGATTGTGGAGGTGCATACATTAAACTCCTAGCAGA
((((((((((.((((((((...&.)))))))).)))))).........)))).
Details
MiRNAhsa-miR-106a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site631,687
Score1.0
Seed1
Au0.647
Energy-20.6
Binding len30
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings21
Pairings in 3prime end5
PositionCDS
2D Structure