Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGTAGAGAGGGCAGTGGGAGG&CTGTCACTGCCGAAAACAGGCCGCAAGAGAGCATCTGCCCA
.(((((((...((((((((.((.&)).))))))))......................))))))).
Details
MiRNAhsa-miR-197-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site81,122
Score0.923
Seed1
Au0.456
Energy-27.6
Binding len41
Me-8.917
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end6
Position5UTR
2D Structure