Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGGGTAGAGAGGGCAGTGGGAGG&TCCTTCTGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
.((((((.((.(((((.((((..&)))).))))).))............................)))))).
Details
MiRNAhsa-miR-197-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1062,1110
Score0.923
Seed1
Au0.574
Energy-25.0
Binding len48
Me-8.932
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure