Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGAGACGCGGCCCTGTTGGAGT&CTCCTAGAGGATGTGGTTCCTCCT
.((((..((.(((((.(.((((.&)))).).)))..)).))..)))).
Details
MiRNAhsa-miR-139-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site961,985
Score0.846
Seed0
Au0.559
Energy-20.0
Binding len24
Me-8.714
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings4
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure