Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCAGTGTTTAGACTATCTGTTC&GCAGATGGTTGGAGATGGA
.(((.(.((..((((((((((..&)))))))))).)).)))).
Details
MiRNAhsa-miR-199b-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1525,1544
Score0.846
Seed0
Au0.588
Energy-15.9
Binding len19
Me-13.523
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure