Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGCAGGCACAGACAGGCAGT&CTGCCCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGG
.(((((((....(((((((((.&))))).................))))......))))))).
Details
MiRNAhsa-miR-214-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1103,1143
Score0.846
Seed1
Au0.603
Energy-20.3
Binding len40
Me-12.264
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure