Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGGTTCCGTCAAGCACCATGG&CCAAATAGAAGATTCAAGTGTTGTTAAACCTGCTGGCTGGCTTGATGATGAACCAA
.((((((((((((((.(((.((&.))...)))...))))))))..)))))).
Details
MiRNAhsa-miR-218-1-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1107,1163
Score0.846
Seed1
Au0.603
Energy-21.9
Binding len29
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure