Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTGGTGTTGTGAATCAGGCCG&GCCTTGTTCATAAAATCACTGGA
..((((((((((((((.((((..&)))).))))))))...)))))).
Details
MiRNAhsa-miR-138-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2602,2625
Score0.923
Seed1
Au0.706
Energy-19.5
Binding len23
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure