Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGGTGAGGTTCTTGGGAGCC&GGCCGCAAGAGAGCATCTGC
.((((((....(((((.(.(((&)))).)))))...)))))).
Details
MiRNAhsa-miR-125a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site99,119
Score0.885
Seed1
Au0.456
Energy-19.5
Binding len20
Me-11.231
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure