Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAATACTGCCGGGTAATGATGGA&CCAGGTACCTGGTGACAGAGGACTGGTATTAA
(((((((((((((((....(((.&)))..))))))))...........))))))).
Details
MiRNAhsa-miR-200c-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site513,545
Score0.846
Seed1
Au0.603
Energy-18.9
Binding len32
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end3
PositionCDS
2D Structure