Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTCTGACTTTATTGCACTACT&GGATCTGGAGATGGGCCGATAAAGTCAGTACGCA
((.((((((((((((..(((((&.)).)))..))))))))))))...)).
Details
MiRNAhsa-miR-301a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1981,2015
Score0.846
Seed0
Au0.544
Energy-20.2
Binding len27
Me-5.728
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure