Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTTGGGTGGAGGCTCTCC&GGAGTATGGAGACCTCCACTGGTCGATAATCCTA
.(((((((((((((((.(((((&.)))))))))))))......))))))).
Details
MiRNAhsa-miR-296-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1312,1346
Score1.0
Seed1
Au0.544
Energy-27.4
Binding len28
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure