Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGGACTTGGAGTCAGAAGGC&GCCTTTTGGCTATGTTTGGGTCTT
...(((((((((((((((((((&)))))))))))....)))))))).
Details
MiRNAhsa-miR-378a-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site217,241
Score0.923
Seed0
Au0.662
Energy-20.6
Binding len24
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
PositionCDS
2D Structure