Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATGTAGGGCTAAAAGCCATGGG&CCCATGGCTTTGGTTGATTTATCTTGTGACAGCAGGAGTGCCAATAGCATT
((((..(((..(((((((((((&)))))))))))............................)))....)))).
Details
MiRNAhsa-miR-135b-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1611,1662
Score0.846
Seed0
Au0.632
Energy-21.5
Binding len51
Me-14.025
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings40
Pairings in 3prime end8
PositionCDS
2D Structure