Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCAGCATCAGTGATTTTGTTG&TAGCAGACACTGATGATTTGATTCTGGAA
(((((((((((((..(((((((&)))))))))))))))........))))).
Details
MiRNAhsa-miR-338-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site680,709
Score0.846
Seed1
Au0.706
Energy-19.8
Binding len29
Me-5.53
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure