Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCTGTCCTCCAGGAGCTCACG&GGTACCTGGTGACAGAGGAC
((((((((..(((((.(((....&))).))))).))))).))).
Details
MiRNAhsa-miR-339-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site516,536
Score0.846
Seed1
Au0.603
Energy-21.8
Binding len20
Me-6.47
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure