Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCTGTCCTCCAGGAGCTCACG&GGAAGCCTCCTAGAGGATGTGGT
.((.(((((((.(((((((..(.&)..))).)))).))))))).)).
Details
MiRNAhsa-miR-339-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site955,978
Score0.904
Seed0
Au0.574
Energy-22.4
Binding len23
Me-10.172
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure