Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTTTCATTATTGCTCCTGACC&GGTCAGAGGATGAGATGAAAGAA
(((((((((....((.((((((&)))))).))....))))))))).
Details
MiRNAhsa-miR-335-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1943,1966
Score0.872
Seed1
Au0.544
Energy-17.6
Binding len23
Me-12.874
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure