Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAATGTTGCTCGGTGAACCCCT&AGGAAGTAGCAGATCACTGGGCTGCAG
...(((.(((((((((......&.))))))))).))).
Details
MiRNAhsa-miR-409-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1502,1529
Score0.846
Seed0
Au0.559
Energy-17.2
Binding len15
Me-8.058
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end2
PositionCDS
2D Structure