Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGTATAGGGCATGGGAA&TCCCAAAACTGGAGTTTTCGAAGAGAAACATGCCAAACCTCC
.(((((....((((((....&.))))))..))))).
Details
MiRNAhsa-miR-202-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site801,843
Score0.846
Seed0
Au0.618
Energy-17.4
Binding len15
Me-9.95
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure