Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAAGGTCTACTGTGTGCCAGG&CTGGAGTTTTCGAAGAGAAACATGCCAAACCTCCAGATGTAGACCTTA
..(((((((((.((.((..(((&.))).)).))))))))))).
Details
MiRNAhsa-miR-493-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site809,857
Score0.923
Seed1
Au0.603
Energy-17.7
Binding len20
Me-9.039
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure