Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTTGTCCGTGTTGTCTTCTCT&GAAGAGACGCGGGGACCA
.((((.((((((((.(((((...&))))))))))))))))).
Details
MiRNAhsa-miR-494-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site38,56
Score0.923
Seed0
Au0.353
Energy-21.3
Binding len18
Me-6.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure