Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGTTGTCCGTGTTGTCTTCTCT&AGAGAAAGCAGCCCTGGAAAAACCA
.((((.((((.(((((.((((((&)))))).)))))..))))..)))).
Details
MiRNAhsa-miR-494-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1779,1804
Score0.885
Seed0
Au0.588
Energy-20.5
Binding len25
Me-8.519
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure