Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTAAAGGGAAGCGCTTTCT&AGGAGGTGTTTGCTTGGGAGT
.((((..(((.(((((((((((&))))))))))).))).)))).
Details
MiRNAhsa-miR-520f-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site132,153
Score0.846
Seed0
Au0.529
Energy-20.0
Binding len21
Me-10.063
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position5UTR
2D Structure