Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCTAGAGGGAAGCGCTTTCTG&AGGAGGTGTTTGCTTGGGAGT
((((..(((.(((((((((((.&))))))))))).))).)))).
Details
MiRNAhsa-miR-519c-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site132,153
Score0.923
Seed0
Au0.529
Energy-20.3
Binding len21
Me-11.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure