Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAGTGCATCTTTTTAGAGGAT&TCCTTTAAGGACATGCCTTG
.(((.((((.(((((((((((.&))))))))))).))))))).
Details
MiRNAhsa-miR-519c-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site2588,2608
Score0.846
Seed0
Au0.676
Energy-18.1
Binding len20
Me-9.155
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure