Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCAGAGGGAAGTACTTTCT&GAGAGCACAGGATCTGGAGA
(((((((.....((.(((((.&))))).))....))))))).
Details
MiRNAhsa-miR-520a-5p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site1972,1992
Score0.846
Seed1
Au0.544
Energy-17.3
Binding len20
Me-15.457
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure