Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAAAGCGCTTCTCTTTAGAGG&CCGGCGGGACTGGTCTGAAGAGACGCGG
.....(((.((((((((((..&.)))))))))).))).
Details
MiRNAhsa-miR-518f-3p
RefseqIDNM_001130675
GeneSymbolCLGN
Binding site22,50
Score0.846
Seed0
Au0.324
Energy-18.9
Binding len16
Me-14.722
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end6
Position5UTR
2D Structure